To supplement our opinionated blog posts analysing the ecosystem, here is a less-opinionated, plain list of relevant libraries written by Clojurians. Not all libraries mentioned here are affiliated with Scicloj, but we seek to be in dialogue with library authors as much as possible.
Do you know about anything relevant that is missing here? - Let us talk!
For every library, we mark whether it is actively developed (act), and whether it is still experimental (exp).
We tag libraries with the field they are relevant to.
array - array programminglinalg - linear algegranative - interop with native-optimized librariesgpu - gpu supportvis - data visualization and visual artvega - visualization using Vega/Vega-lite specificationslit - literate programmingui - building UIs for data explorationgeo - geographical and geometrical data processingdf - dataframe-like data structures and abstructionsdata - general data processingcsv - csv supportxform - transducers supportmath - diverse math functionsstat - statisticsts - time series analysisrand - simulation and random samplingprob - Bayesian computing and probabilistic programmingml - machine learningdl - deep learningopt - optimizationgraph - graph algorithms and network analysisinterop - general libraries for interopcljs - supports not only Clojure but also Clojurescriptact): opt,df,vis,rand,graph,ui - a toolbox for data-science and operation researchact): math,stat,rand,ml - a collection of functions for mathematical and statistical computing, macine learning, etc., wrapping several JVM librariesdf,stat,vis,rand,csv - an R-like data-science platform built on top of the core.matrix abstractionsdf,stat,vis - a toolbox for data-science using plain sequences of mapsact): array,native,stat - abstractions and foundations for working with array-like structures and sequential structuresact,exp): array,linalg,native,gpu - bindings to tvmact): array,linalg,native,gpu - matrix and linear algebra in Clojurearray,linalg,native,gpu - bindigs to ND4Jarray,linalg,native,cljs - matrix abstractions, supporting diffent backendsarray,linalg,native,gpu - Neanderthal backend for core.matrixact): opt - optimisation and control theory tools and convenience functions based on Neanderthal.act): vis,vega,ui,hiccup,cljs - a template system for creating interactive data visualizations using Vega/Vega-lite, Reagent and Re-Comact): vis,vega,lit,ui,hiccup,cljs - a literate programming application written using Hanamiact): vis,vega,lit - data visuzliation using Vega/Vega-Lite and Hiccup, and a live-reload platform for literate-programmingact): vis,vega,cljs - simple data visualization for Clojure/Clojurescript that using vega and darkstar for renderinglit - a notebook application written in Clojure and Javascriptvis,vega - plotting functions using Vega for Gorilla-REPLact,exp, temporary name): vis,lit,ui,cljs - a port of the Gorilla REPL project using a Clojurescript (Reagent) frontendvis,r - a clojure DSL for creating ggplot2 plots using Rvis - a clojure/clojuresctit wrapper for Processingvis,cljs - 2d/3d geometry toolkitvis, lit - rendering Clojure code in various format using Rmarkdownlt - executing Clojure inside Emacs Org-mode documentsact,exp): vis - a data visualization platform written in Clojure and inspired by R's ggplot2 and lattice librariesexp): vis,cljs - generating charts and SVG with a syntax similar to Incanter's and a visual theme similar to ggplot2.lit,cljs- visual repl exprience for Clojurescriptvis - an Atom plugin for displaying tables and graphslit, vis, cljs: a Clojurescript coding environment for beginnersact): lit - a Clojure kernel for Jupyterlit - a Clojure kernel for Jupyteract,exp): lit - notebook experience with Clojure namespaces edited at any editoract): data navigation GUIact): data navigation GUIIn addition to Oz, Hanami and Gorilla-plot mentioned above, here is a list of dedicated tools dedicated mainly to handling Vega/Vega-lite specifications. See this conversation for some discussion of the differences and tradeoffs across these tools.
vis,vega,cljs - grammer of graphics over Vegaact): vis,vega - a nodejs clojurescript library designed to validate and render Vega and Vega-lite files - supports docker-based setup.act): vis,vega - a clojure wrapper for the (node-based) Vega-cli and Vega-lite standalone scripsvis,vega - a command line tool that wraps Vega and Vega-lite - using GraalVM polyglot programmingvis,vega - a static-site viewer using javafx that renders Vega specsvis,vega - a minimal wrapper over Vega/Vega-lite as a single JVM-only Clojure library, using the GraalJS javascript runtime, which does not require GraalVM runtime to run. act): vis, vega - an emacs mode to facilitate interactive data visualization using Vega from within emacs - supports elisp, json and clojure notationsact): data,cljs - declarative navigation of nested data structures for selection and transformation in Clojure and Clojurescriptact): data,cljs - transforming neseted data structures by declaratively declaring the shape of source and target datastructuresdata - processing nested data structures by extensible logic programmingdata,cljs,xform - a collection of transduces and reducing functionscsv,cljs - higher level csv parsing/processingact): geo - unifying several JVM libraries for geoprocessing with a Clojure APIact): geo,cljs - encoding/decoding of geographic datatypesact,exp): geo, xform - transducible analysis of geospatial featuresact): df,stat,vis,csv - abstractions for dataframe-like structures in clojure, based on tech.datatype abstractions, with an implementation using the Tablesaw Java libraryact): df,csv - a dataframe grammar wrapping tech.ml.dataset, inspired by serveral R librariesdf,py - a Clojure API wrapping Python's Pandas libraryexp): df,csv - Pandas-like data-processing for clojure with some I/O functionalitydf - Pandas-like data processing for clojureact,exp): df,xform - Pandas-like data processing using transducersdf - a minimal data processing library for Clojure, with some of the capabilities of pandas and numpystat,rand,xform - statistics and random sampling using transducersstat - fitting distributionsts: STL and FastDTW algorithmsprob,rand,vis - extensible probabilistic programming in Clojure itself (rather than a language variation), with support for visualizationsprob,gpu - Bayesian computing using the GPUrand - support srandom sampling of different kindsrand,prob - random sampling and some basic Bayesian computing for certain families of distributionsexp): prob,rand,cljs - an embedded languages for probabilistic programming and metaprogrammingprob,rand,cljs - a probabilistic programming language written in clojure, that supports a subset of clojureact): rand,cljs - an event-driven engine for Clojure(script) heavily borrowing ideas from discrete-event simulation and hybrid dynamical systemsact): rand - randomized date generation supporting CSV outputrand - a client to the Drand randomness servifdceact): ml - a machine learning platform based on tech.ml.dataset, supporting not just ml algorithms, but also relevant ETL processing; wraps multiple machine learning librariesact): ml - Evolution of tech.ml library towards full support of pipelinesml - machine learning based on wrapping libraries such as the Weka Java libraryml - a wrapper for XGBoostml - an implementation of the propagator computational modelact): ml - an implementation of the Push programming language for genetic programmingact): ml - "Yet another Push-based genetic programming system in Clojure"dl - bindings to Apache MXNet - part of the MXNet projectact): dl,native,gpu - infrastructure for tensor computation and deep learningdl - a wrapper for deeplearning4jdl - a deep learning library written in Clojuredl - dynamic neural networks in Clojureact): interop - interop with Pythonact): interop - using libpython-clj from an already running python process, without needing any special python buildsact): interop - interop with R and Renjin (R on the JVM)interop - interop with FastR (GraalVM's R)interop - interop with Scalapmap, future, and foract) - parallelization and threading primitivesact, exp) - df: a Spark wrapperact) - a wrapper for Kafka and Kafka Streamsact) - various components for interacting with Kafka using Jackdawact) - a wrapper for Kafka and Kafka Streams