Clojurists Together project - Scicloj community building - October 2024 update

Posted November 3, 2024 by daslu ‐ 6 min read

The Clojurists Together organisation has decided to sponsor Scicloj community building for Q3 2024, as a project by Daniel Slutsky. This is the second time the project is selected this year. Here is Daniel’s update for October.

Comments and ideas would help. 🙏

Clojurists Together update - October 2024 - Daniel Slutsky

Scicloj is a Clojure group developing a stack of tools and libraries for data science. Alongside the technical challenges, community building has been an essential part of its efforts since the beginning of 2019. Our current main community-oriented goal is making the existing data-science stack easy to use through the maturing of the Noj library, mentioned below. In particular, we are working on example-based documentation, easy setup, and recommended workflows for common tasks.

All these, and the tools to support them, grow organically, driven by real-world use cases.

I serve as a community organizer at Scicloj, and this project was accepted for Clojurists Together funding in 2024 Q1 & Q3. I also receive regular funding through Github Sponsors, mostly from Nubank.

In this post, I am reporting on my involvement during October 2024, as well as the proposed goals for October.

I had 57 meetings during September. Most of them were one-on-one meetings for open-source mentoring or similar contexts.

All the projects mentioned below are done in collaboration with others. I will mention at least a few of the people involved. For consistency, I use people’s github handles when mentioning their work on the projects, and their full names when mentioning public talks.

October 2024 highlights

Scicloj open-source mentoring

This month, we contined working with mentees under the open-source mentoring program.

@generatme, @phronmophobic, @jeaye, and myself have been active as mentors this month. Since the program’s beginning at the middle of August, 62 people have applied – 15 of them during the last month. 39 are still actively exploring various topics, and out of them, 15 have already made important contributions.

One notable change happened during the last few months: we started working with a few mentees who are completely new to Clojure, some even to programming. This is part of Scicloj’s gradual process of opening up to broader audiences.

Some of the recent experiences and insights on this project were discussed in our recent video report (2024-10-25).

Noj

The Noj library is the entry point to data science with Clojure, collecting a stack of relevant libraries. This month, we worked towards its release into Beta stage, which is almost complete.

At the Zulip chat, we had quite a few insightful discussions with important feedback by community members about the scope and the organization of the project.

Most of our efforts in this project have been into writing additional tutorials. A broad group of people are working on these, and a few promosing tutorials are currently in draft stage. See some details below in the Tutorials section.

@behrica has made additional improvements to the automation and whole workflow of Noj in Github Pages.

I worked on clarifying many details and improving the main documentation pages.

Tableplot (previously called Hanamicloth)

Towards reaching Beta stage, our acively-developed plotting library recieved a new name: Tableplot.

I continued working on extending its features, adding flexibility to the way data can be specified throughout the pipelines, and integrating metamorph.ml to allow for a more flexible smoothing functionality, where the user can specify the model details and the design matrix.

Composing Fastmath with Tablecloth

During this month, a few substantial design discussions took place in the Zulip chat, with quite a few community members helping with their insights. One of the important realizations was that we should integrate Fastmath (the math library) into Tablecloth (the user-friendly table-processing library). This will allow for better composability, ergonomics, and performance in various cases where data processing meets math and statistics.

Scittle Emmy-viewers plugin

Recently, @reedho has made some progress in the Scittle plugin that supports Emmy-viewers data visualizations. I was helping in testing and figuring out some of the details. This progress is expected to extend the reach of Emmy-viewers to a broader set of use cases and integrate it better into Scicloj workflows.

Clay

Clay, the REPL-friendly notebook and data visualation tool, recieved a few new features:

  • initial Emmy-viewers support
  • support for nesting of special visualization kinds
  • support for live-reload on file save by @whatacold

Additionally, @a13 and I are working on improving the process of reading Clojure code, building on previous work by @timothypratley at the read-kinds project.

Kindly-advice

Kindly-advice is a small library that helps tools know how certain values should be visualized.

Following the developments with Emmy-viewers, it can now recognize these automatically, so that tools can handle them appropriately.

Kindly-render

Kindly-render is a tool-agnosic implementation of the Kindly standard.

During October, @timothypratley and @kpassapk kept working on this project. I started exploring its intergation into Clay.

Tutorials

Documenting and demonstrating the use of the Scicloj stack is one of the main goals at the moment, and quite a few of us are working on various tutorials. This is often a slow process that involved introspection and discussion of the recommended ways to explain certain notions and perform certain tasks.

I was involved in writing some tutorials and in reviewing a few others.

A few of the current drafts people have been working on can already be shared:

Website

This month has been a usual month in terms of website maintenance.

real-world-data group

The real-world-data group is a space for Clojure data practitioners to share their experiences. During October, the group had two meetings. We decided to share some parts of the recordings publicly:

Scicloj weekly catchup

During October, we tried the approach of weekly group meetings for the open-source-mentoring program, in addition to the small and 1-1 meetings.

We had four group meetings of this kind. A few people have shared their work, and we explored some topics as a group. Eventually, we realized that the timing and format were not optimal for most people, so this series is currently on hold.

Linear Algebra meetings

A few of use are working on tutorials related to linear algebra and vector processing, and have started meeting weekly on these topics. We had four meetings of this kind.

Clojure Conj

Eventually, we organized only one talk run before the Clojure Conj conference. This was an early run of the talk by Thomas Clark. The actual talk has already been published online. It is a fantastic overview of the Clojure stack for scientific computing.

On my side, I helped a little bit in the preparations for the talk.

November 2024 goals

Noj

  • Annouce Beta stage.
  • Continue the current efforts on documenting the libraries.

Fastmath

  • Continue the documetation effort.

Tablecloth

  • Start working on drafts integrating Fastmath-related functionality.

Tableplot

  • Annouce Beta stage after a minor changes.
  • Keep extending and documenting the library.

Tooling

  • Return to the work on kindly-render.
  • Explore improving the support of various tools for scientific Clojure. Most importantly: VSCode, Quarto, and Jupyter.
  • Continue Clay maintenance.